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wombat:startingvalues: 26 Hits
r the same (or very similar) traits from previous analyses which can be used as guideline. For instance, est... s of starting values from a series of preliminary analyses.
===== Univariate analyses =====
Preliminary, univariate analyses for all traits of interest are highly recommended !
- Univariate analys
wombat:runtimeoptions: 22 Hits
so-called advanced run time options.
While simple analyses tend to work well without them, using these optio... n greatly enhance reliability and efficiency for
analyses involving more than a few traits (or RR coefficen... ave a big impact on the convergence rates of REML analyses.
==== Logarithmic transformation of diagonal
wombat:updates: 15 Hits
ed.
== 5/4/2009 ==
Changed rules for sire model analyses: require "subject" identifier in data & model par... sorting of data file; new SPECIAL option CLONES. Analyses with very low (<10% but >0%) proportions of repea... '––choozhz'' was only recognised for animal model analyses; now enabled for sire models as well.
==== 2008
wombat:examples: 7 Hits
of 9 example data sets with a number of different analyses shown for most of them to illustrate different mo... model|
| [[Ex4Page|Example4]]| 4| Multivariate analyses fitting a simple animal model; multiple fixed eff... iables|
| [[Ex5Page|Example5]]| 6| Multivariate analyses fitting a simple animal model; demonstrate reduce
wombat:faqs: 6 Hits
is overparameterised, which includes multivariate analyses where some covariance matrices have eigenvalues w... aim is to obtain `adjustment factors' for other analyses, it is best to //fit the appropriate model// from... matrices for multivariate (and random regression) analyses must be //positive definite// (p.d.). The statist
wombat:specialanalyses: 4 Hits
<texit info>
author=Karin Meyer
title=Specialised analyses with WOMBAT
</texit>
====== Specialised analyses with WOMBAT ======
This page provides some hints for non-standard analyses.
===== Fitting a fact... he same individual together and, for multivariate analyses, sorted in ascending trait number). This will cau
wombat:converged: 2 Hits
Meyer
title=WOMBAT: Convergence criteria in REML Analyses
</texit>
====== Checking convergence of REML analyses ======
WOMBAT employs iterative schemes to locate the maximum of the (log) likelihood functio
wombat:hypotheses: 2 Hits
hor=Karin Meyer
title=Hypothesis testing for REML analyses
</texit>
====== Hypothesis testing for REML analyses ======
With a maximum likelihood framework of estimation, tests based on the (log) likeli
wombat:faqwin: 1 Hits
e to use all the RAM you have available for large analyses! Please read the caveats and compile notes for th
wombat_front: 1 Hits
verged|Checking convergence]]
- [[wombat:specialanalyses|Specialised analyses]]
- [[wombat:Hypotheses|Hy