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wombat:faqs: 26 Hits
alculations in WOMBAT assume that the coefficient matrix in the mixed model equations for the model fitted... is positive definite. In essence, the coefficient matrix is factored sequentially and the `pivot' is the c... ion analysis. Usually this is due to a covariance matrix to be estimated which is close to the bounds of t
wombat:ex1page: 11 Hits
1 60.000000
END data
Coefficient matrix fixed effects - rank = 2 no. of rows = 2... END "lsqfixed"
No. of equations in full rank submatrix = 308
Elements in MMM - after data ... D = 0.0000 0.0000 Time 0
AI matrix : min. & max. eigenvalue 0.580946 6.50567
fortran:frontgeninv: 9 Hits
generalised inverse of real symmetric, halfstored matrix
! input file: non-zero elements of matrix, one li... '
write(*,*)'Give size (no. of rows/columns) of matrix: '
read(*,*,iostat=ii) neqns
if(ii/=0) then
wr... of rows/columns specified = ',neqns
! allocate matrix
allocate(avec(neqns*(neqns+1)/2), stat=ii)
if( ii
fortran:geninverse: 6 Hits
), dimension(n*(n+1)/2), intent(inout) :: a ! matrix; upper triangle, stored row-wise
real(8), inten... t(out) :: nrank ! rank of matrix
real(8), dimension(n) ::... imaxm1,imaxp1,ij,j,i,neg
! matrix is a scalar
if( n == 1 )then
if(a(1) > ze
wombat:specialanalyses: 6 Hits
or of //m// common effects (**c**), weighted by a matrix of factor loadings (**F**), and a vector of //q//... *F** **F**' + **D**,
with **D** the the diagonal matrix of specific variances.
WOMBAT allows for the fir... n the first instance with reduced rank covariance matrix, representing the common factors, and in the seco
wombat:updates: 5 Hits
ffects in conjunction with a general
relationship matrix. Changed - WOMBAT now allows both NRM and GIN opt... d.
== 8/1/2008 ==
Added option for `stand-alone' matrix inversion.
==== 2007 ====
== 20/11/2007 ==
Have... (made faster) computation of average information matrix in reduced rank analyses - Cholesky factor of num
wombat:runtimeoptions: 5 Hits
s.
==== Repeated reordering of the mixed model matrix ====
When determining the Cholesky decomposition... s determined for this sequence, derived from the matrix of starting values.
It would be easiest to maint... operations per iterate and determining the sparse matrix structure of the mixed model matrix (symbolic fac
wombat:startingvalues: 3 Hits
nctions corresponding to the chosen basis for one matrix at a time.
===== Building a grid =====
Take a ... nsider a grid of 3 values with genetic covariance matrix
<latex>
{\bf G} = \left( \begin{array}{rrr}
436... .2247 & 1.58114 \end{array} \right)
</latex>
The matrix of covariances among RR coefficients can then be
fortran:fortran: 3 Hits
s.zip|}}
===== Generalised inverse of symmetric matrix=====
Fortran 90 rewrite of subroutine DKMWHF (de... obtain a generalised inverse of a real, symmetric matrix.
[[GenInverse|dkmxhf.f90]]
Simple front-end program to DKMXHF which reads in the matrix from a file & writes out the inverse to another file
(DKMXH
wombat:wombatcites: 1 Hits
cle{chenoweth2008qmg,
title = {QST meets the G matrix: the dimensionality of
adaptive
wombat:wombatauxf90: 1 Hits
rs_.bin" -> inverse of numerator relationship matrix
implicit none
integer :: i, ii, na